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4TZP

As Grown, Untreated Co-crystals of the Ternary Complex Containing a T-box Stem I RNA, its cognate tRNAGly, and B. subtilis YbxF protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.2
Synchrotron siteALS
Beamline5.0.2
Temperature [K]100
Detector technologyCCD
Collection date2013-08-13
DetectorADSC QUANTUM 315r
Wavelength(s)0.9793
Spacegroup nameC 2 2 21
Unit cell lengths108.730, 108.749, 291.811
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.630 - 8.503
R-factor0.2779
Rwork0.267
R-free0.37330
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4lck
RMSD bond length0.004
RMSD bond angle0.818
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.630
High resolution limit [Å]8.5008.500
Rmerge0.0831.080
Number of reflections1651
<I/σ(I)>10.61.7
Completeness [%]99.9100
Redundancy6.76.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29350 mM Bis-Tris (HCl) pH 6.5, 300 mM Li2SO4, and 20% (w/v) PEG3350, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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PDB entries from 2024-05-15

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