4TW0
Crystal Structure of SCARB2 in Acidic Condition (pH4.8)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-17A |
Synchrotron site | Photon Factory |
Beamline | BL-17A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-10-29 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.91998 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 103.990, 99.636, 125.853 |
Unit cell angles | 90.00, 90.02, 90.00 |
Refinement procedure
Resolution | 48.060 - 3.648 |
R-factor | 0.2519 |
Rwork | 0.249 |
R-free | 0.30350 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4f7b |
RMSD bond length | 0.006 |
RMSD bond angle | 1.281 |
Data reduction software | SCALEPACK |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.9_1692)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 3.710 |
High resolution limit [Å] | 3.648 | 9.880 | 3.650 |
Rmerge | 0.141 | 0.040 | 0.707 |
Number of reflections | 28909 | ||
<I/σ(I)> | 6.5 | ||
Completeness [%] | 98.4 | 96.4 | 98.1 |
Redundancy | 2.9 | 2.8 | 2.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 289 | 0.2 mol/L ammonium sulfate, 0.1 mol/L sodium acetate trihydrate(pH 4.8), 30% w/v polyethylene glycol monomethyl ether 2000 |