4RY8
Crystal structure of 5-methylthioribose transporter solute binding protein TLET_1677 from Thermotoga lettingae TMO TARGET EFI-511109 in complex with 5-methylthioribose
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-11-22 |
Detector | RAYONIX MX225HE |
Spacegroup name | P 1 |
Unit cell lengths | 57.622, 67.848, 83.653 |
Unit cell angles | 91.83, 92.39, 89.93 |
Refinement procedure
Resolution | 50.000 - 1.750 |
R-factor | 0.21593 |
Rwork | 0.214 |
R-free | 0.26356 |
Structure solution method | SAD |
RMSD bond length | 0.013 |
RMSD bond angle | 1.601 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | SHELX |
Refinement software | REFMAC (5.8.0073) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.780 |
High resolution limit [Å] | 1.750 | 1.750 |
Rmerge | 0.137 | 0.710 |
Number of reflections | 128230 | |
<I/σ(I)> | 10 | 2.1 |
Completeness [%] | 97.1 | 94.9 |
Redundancy | 3.9 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 294 | PROTEIN (10 MM HEPES PH 7.5, 5 MM DTT); RESERVOIR: 0.1 M HEPES-NAOH, PH 7.5, 0.2 M MAGNESIUM CHLORIDE, 30% PPG P400; CRYOPROTECTION: RESERVOIR SOLUTION; VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 294K; |