4RVW
Structure of the bacterial Zn-transporter ZnuD from Neisseria meningitidis (soaked with 20 micromolar Zinc)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-05 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.2695 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 101.548, 149.592, 157.590 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.541 - 4.477 |
R-factor | 0.3195 |
Rwork | 0.317 |
R-free | 0.37960 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.004 |
RMSD bond angle | 0.743 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.9_1692) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.541 | 47.541 | 4.720 |
High resolution limit [Å] | 4.477 | 14.160 | 4.480 |
Rmerge | 0.020 | 0.020 | |
Total number of observations | 2667 | 14057 | |
Number of reflections | 7456 | ||
<I/σ(I)> | 8.7 | 6.3 | 0.3 |
Completeness [%] | 99.0 | 97 | 99.2 |
Redundancy | 12.5 | 10 | 13.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.6 | 300 | 0.1M sodium cacodylate pH 6.6, 0.5M Magnesium Sulfate, 2% (w/v) Ethylene glycol, 0.7mM Cadmium chloride; 10 mM ZnCl soaking, vapor diffusion, hanging drop, temperature 300K |