4RT2
Ternary complex crystal structure of DNA polymerase Beta with (alpha,beta)-CH2-(beta,gamma)-NH-dTTP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-02-07 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.54108 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.587, 79.409, 55.315 |
Unit cell angles | 90.00, 107.27, 90.00 |
Refinement procedure
Resolution | 21.239 - 1.920 |
R-factor | 0.1787 |
Rwork | 0.176 |
R-free | 0.21080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2fms |
RMSD bond length | 0.007 |
RMSD bond angle | 1.020 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.990 |
High resolution limit [Å] | 1.920 | 4.140 | 1.920 |
Rmerge | 0.084 | 0.047 | 0.493 |
Number of reflections | 30067 | ||
<I/σ(I)> | 13.8 | ||
Completeness [%] | 94.0 | 97.9 | 67.4 |
Redundancy | 3.6 | 3.6 | 2.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 7.5 | 291 | 16-18% PEG3350, pH 7.5, vapor diffusion, temperature 291K |