4RLE
Crystal structure of the c-di-AMP binding PII-like protein DarA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-1 |
Synchrotron site | ESRF |
Beamline | ID23-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2014-05-12 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.9100 |
Spacegroup name | P 63 |
Unit cell lengths | 56.521, 56.521, 58.201 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 37.461 - 1.300 |
R-factor | 0.1305 |
Rwork | 0.130 |
R-free | 0.15450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3m05 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.469 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 37.461 | 1.350 | |
High resolution limit [Å] | 1.300 | 17.000 | 1.300 |
Rmerge | 0.025 | 0.016 | 0.176 |
Number of reflections | 26017 | 14 | 2789 |
<I/σ(I)> | 38.86 | 55.61 | 10.49 |
Completeness [%] | 99.9 | 93.3 | 100 |
Redundancy | 6.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292 | 0.1-0.2 M sodium tartrate, 16-20% PEG5000, 10 mM DTT, vapor diffusion, sitting drop, temperature 292K |