4RK8
Crystal structure of human dihydroorotate dehydrogenase (DHODH) with DH03A356
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2014-06-29 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97852 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 90.820, 90.820, 122.851 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.410 - 2.220 |
R-factor | 0.14385 |
Rwork | 0.142 |
R-free | 0.17659 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3js3 |
RMSD bond length | 0.018 |
RMSD bond angle | 2.117 |
Data reduction software | HKL-2000 |
Phasing software | auto (MR) |
Refinement software | REFMAC (5.7.0029) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.410 | 2.340 |
High resolution limit [Å] | 2.220 | 2.220 |
Number of reflections | 28102 | |
Completeness [%] | 95.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.8 | 293 | 0.1M acetate pH 4.8, 40 mM UDAO, 20.8 mM, N,N-dimethyldecylamine-N-oxide (DDAO), 2mM DHO, 1.6-1.8M ammonium sulfate, 1 mM inhibitor, VAPOR DIFFUSION, HANGING DROP, temperature 293K |