4QVG
Crystal structure of S-adenosylmethionine-dependent methyltransferase SibL in its apo form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE BL13B1 |
Synchrotron site | NSRRC |
Beamline | BL13B1 |
Temperature [K] | 200 |
Detector technology | CCD |
Collection date | 2013-06-30 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9794 |
Spacegroup name | F 2 2 2 |
Unit cell lengths | 102.931, 295.421, 322.231 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 28.116 - 2.900 |
R-factor | 0.2135 |
Rwork | 0.211 |
R-free | 0.26580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4u1q |
RMSD bond length | 0.010 |
RMSD bond angle | 1.382 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.000 |
High resolution limit [Å] | 2.900 | 2.900 |
Rmerge | 0.211 | |
Number of reflections | 54730 | |
Completeness [%] | 99.7 | 100 |
Redundancy | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 9 | 277 | 10%(v/v) Polyethylene glycol 200, 0.1 M BIS-TRIS propane pH 9.0, 18%(w/v) Polyethylene glycol 8,000 , VAPOR DIFFUSION, SITTING DROP, temperature 277K |