Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4Q9A

Crystal structure of a putative GDSL-like lipase (PARMER_00689) from Parabacteroides merdae ATCC 43184 at 2.86 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]100
Detector technologyPIXEL
Collection date2013-11-27
DetectorDECTRIS PILATUS 6M
Spacegroup nameI 4 2 2
Unit cell lengths128.829, 128.829, 149.650
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution48.817 - 2.860
R-factor0.1847
Rwork0.182
R-free0.23230
Structure solution methodSAD
RMSD bond length0.010
RMSD bond angle1.060
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELX
Refinement softwareBUSTER-TNT (2.10.0)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.81748.8172.960
High resolution limit [Å]2.8606.1102.860
Rmerge0.1400.0530.763
Number of reflections1484516361417
<I/σ(I)>11.6228.72.2
Completeness [%]99.598.999.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.22770.200M sodium chloride, 40.00% polyethylene glycol 400, 0.1M Na/K phosphate pH 6.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K

231029

PDB entries from 2025-02-05

PDB statisticsPDBj update infoContact PDBjnumon