4Q9A
Crystal structure of a putative GDSL-like lipase (PARMER_00689) from Parabacteroides merdae ATCC 43184 at 2.86 A resolution
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-27 |
Detector | DECTRIS PILATUS 6M |
Spacegroup name | I 4 2 2 |
Unit cell lengths | 128.829, 128.829, 149.650 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 48.817 - 2.860 |
R-factor | 0.1847 |
Rwork | 0.182 |
R-free | 0.23230 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.060 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | BUSTER-TNT (2.10.0) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.817 | 48.817 | 2.960 |
High resolution limit [Å] | 2.860 | 6.110 | 2.860 |
Rmerge | 0.140 | 0.053 | 0.763 |
Number of reflections | 14845 | 1636 | 1417 |
<I/σ(I)> | 11.62 | 28.7 | 2.2 |
Completeness [%] | 99.5 | 98.9 | 99.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.2 | 277 | 0.200M sodium chloride, 40.00% polyethylene glycol 400, 0.1M Na/K phosphate pH 6.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |