4PW5
structure of UHRF2-SRA in complex with a 5hmC-containing DNA, complex I
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL17U |
Synchrotron site | SSRF |
Beamline | BL17U |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-05-25 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9789 |
Spacegroup name | P 1 |
Unit cell lengths | 42.273, 82.807, 82.864 |
Unit cell angles | 90.05, 90.00, 89.98 |
Refinement procedure
Resolution | 41.432 - 2.204 |
R-factor | 0.1631 |
Rwork | 0.161 |
R-free | 0.20640 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3oln |
RMSD bond length | 0.006 |
RMSD bond angle | 0.952 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1491)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.098 | 0.483 |
Number of reflections | 54600 | |
<I/σ(I)> | 8.6 | |
Completeness [%] | 96.5 | 95.2 |
Redundancy | 2.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 20% ethanol and 0.1 M Tris pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K |