4PMT
The structure of TrkA kinase bound to the inhibitor N~4~-(4-morpholin-4-ylphenyl)-N~6~-(pyridin-3-ylmethyl)pyrido[3,2-d]pyrimidine-4,6-diamine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2010-04-17 |
Detector | MARMOSAIC 300 mm CCD |
Spacegroup name | P 64 |
Unit cell lengths | 75.700, 75.700, 112.680 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 22.490 - 2.100 |
R-factor | 0.1859 |
Rwork | 0.185 |
R-free | 0.20870 |
RMSD bond length | 0.010 |
RMSD bond angle | 1.020 |
Data reduction software | XDS (0.1.27) |
Refinement software | BUSTER (2.11.5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 56.670 | 56.670 | 2.350 |
High resolution limit [Å] | 2.100 | 4.700 | 2.100 |
Rmerge | 0.066 | 0.028 | 0.453 |
Rpim | 0.030 | 0.013 | 0.206 |
Total number of observations | 121896 | 10774 | 34577 |
Number of reflections | 21349 | ||
<I/σ(I)> | 17.8 | 45.4 | 4 |
Completeness [%] | 99.9 | 99.8 | 99.8 |
Redundancy | 5.7 | 5.6 | 5.7 |
CC(1/2) | 0.999 | 0.999 | 0.908 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 277 | 0.1M Bis-Tris, 2.3M AmmoniumAcetate |