4PF8
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM SULFITOBACTER sp. NAS-14.1 (TARGET EFI-510299) WITH BOUND BETA-D-GALACTURONATE
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 31-ID |
| Synchrotron site | APS |
| Beamline | 31-ID |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2014-04-02 |
| Detector | RAYONIX MX225HE |
| Wavelength(s) | 0.9793 |
| Spacegroup name | P 1 |
| Unit cell lengths | 57.979, 58.014, 62.968 |
| Unit cell angles | 115.62, 104.69, 94.16 |
Refinement procedure
| Resolution | 27.923 - 1.500 |
| R-factor | 0.1482 |
| Rwork | 0.147 |
| R-free | 0.16500 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 4ovq |
| RMSD bond length | 0.011 |
| RMSD bond angle | 1.299 |
| Data scaling software | Aimless |
| Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 53.850 | 53.850 | 1.530 |
| High resolution limit [Å] | 1.500 | 8.220 | 1.500 |
| Rmerge | 0.095 | 0.093 | 0.698 |
| Rpim | 0.056 | 0.060 | 0.406 |
| Total number of observations | 414615 | 1583 | 20449 |
| Number of reflections | 106185 | ||
| <I/σ(I)> | 10.9 | 22.8 | 2.3 |
| Completeness [%] | 94.8 | 71.2 | 93.6 |
| Redundancy | 3.9 | 3.3 | 4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | Protein (31.8 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Galacturonate); Reservoir (2.4 M Sodium Malonate pH 7.0); Cryoprotection (80% Reservoir + 20% Diethylene Glycol |






