Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4PE3

CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM RHODOBACTER SPHAEROIDES (Rsph17029_3620, TARGET EFI-510199), APO OPEN STRUCTURE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-04-09
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 21 21 2
Unit cell lengths79.072, 97.938, 35.788
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution25.609 - 1.350
R-factor0.1706
Rwork0.169
R-free0.19600
Structure solution methodSAD
RMSD bond length0.018
RMSD bond angle1.302
Data scaling softwareAimless (0.1.27)
Refinement softwarePHENIX ((phenix.refine: 1.8.1_1168))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]26.36026.3601.370
High resolution limit [Å]1.3507.3901.350
Rmerge0.1200.0920.917
Rpim0.0330.0280.247
Total number of observations878379447841986
Number of reflections61112
<I/σ(I)>14.1273.2
Completeness [%]98.890.697.5
Redundancy14.411.114.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5298Protein (34.6 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 1 mM D-Glycerate); Reservoir (0.2 M Zinc Acetate, 0.1 M Imidazole pH 6.5, 10%(w/v) PEG 8000); Cryoprotection (80% Reservoir, 20% Ethylene glycol)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon