4PDJ
Neutron crystal Structure of E.coli Dihydrofolate Reductase complexed with folate and NADP+
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 291 |
Detector technology | IMAGE PLATE |
Collection date | 2013-09-10 |
Detector | RIGAKU |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.293, 45.625, 98.974 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.403 - 1.994 |
R-factor | 0.2322 |
Rwork | 0.230 |
R-free | 0.27070 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1rx2 |
RMSD bond length | 0.092 |
RMSD bond angle | 0.915 |
Data reduction software | SCALA |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1358)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.100 | 1.700 |
High resolution limit [Å] | 1.599 | 1.994 | 1.599 |
Rmerge | 0.310 | ||
Number of reflections | 20751 | ||
<I/σ(I)> | 5.3 | 3.2 | |
Completeness [%] | 79.3 | 61.3 | |
Redundancy | 7.5 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 40mg/mL DHFR-folate-NADP+ complex, 12% (v/v) PEG400, 100 mM MnCl2, 20 mM imidazole, pH7.0 |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 40mg/mL DHFR-folate-NADP+ complex, 12% (v/v) PEG400, 100 mM MnCl2, 20 mM imidazole, pH7.0 |