4PD6
Crystal structure of vcCNT-7C8C bound to uridine
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 24-ID-C |
| Synchrotron site | APS |
| Beamline | 24-ID-C |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2011-08-01 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 1.000 |
| Spacegroup name | P 63 |
| Unit cell lengths | 119.650, 119.650, 83.110 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 35.430 - 2.080 |
| R-factor | 0.204 |
| Rwork | 0.202 |
| R-free | 0.23300 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 3tij |
| RMSD bond length | 0.005 |
| RMSD bond angle | 0.782 |
| Data scaling software | SCALEPACK |
| Refinement software | PHENIX ((PHENIX.REFINE: 1.8.4_1496)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.120 |
| High resolution limit [Å] | 2.080 | 5.640 | 2.080 |
| Rmerge | 0.052 | 0.025 | 0.554 |
| Total number of observations | 238922 | ||
| Number of reflections | 40394 | ||
| <I/σ(I)> | 15.3 | ||
| Completeness [%] | 99.3 | 98.7 | 91.8 |
| Redundancy | 5.9 | 6.1 | 4.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | LIQUID DIFFUSION | 9.5 | 290 | 37-42% PEG 400, 100 mM CaCl2 |






