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4PD5

Crystal structure of vcCNT-7C8C bound to gemcitabine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyCCD
Collection date2012-04-09
DetectorADSC QUANTUM 315
Wavelength(s)1.0004
Spacegroup nameP 63
Unit cell lengths119.046, 119.046, 82.285
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution43.684 - 2.906
R-factor0.2283
Rwork0.227
R-free0.25760
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3tij
RMSD bond length0.004
RMSD bond angle0.664
Data scaling softwareSCALEPACK
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.970
High resolution limit [Å]2.9007.1502.900
Rmerge0.0610.0430.554
Total number of observations83148
Number of reflections14694
<I/σ(I)>11.5
Completeness [%]99.699.399
Redundancy5.76.54.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1LIQUID DIFFUSION8.529037-42% PEG400, 100 mM CaCl2

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