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4PCD

CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS OCh 114 (RD1_1052, TARGET EFI-510238) WITH BOUND L-GALACTONATE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2014-04-02
DetectorRAYONIX MX225HE
Wavelength(s)0.9793
Spacegroup nameP 21 21 21
Unit cell lengths52.375, 73.260, 75.889
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.607 - 1.700
R-factor0.1376
Rwork0.135
R-free0.17910
Structure solution methodSAD
RMSD bond length0.012
RMSD bond angle1.186
Data reduction softwareMOSFLM
Data scaling softwareAimless
Refinement softwarePHENIX ((phenix.refine: 1.8.1_1168))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]75.89075.8901.730
High resolution limit [Å]1.7009.0001.700
Rmerge0.1350.0850.726
Rpim0.0410.0340.218
Total number of observations383228128820359
Number of reflections32764
<I/σ(I)>1620.25.1
Completeness [%]99.873.899.9
Redundancy11.76.311.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5298Protein (42.4 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-MANNONATE); Reservoir (0.1 M Tris pH 8.5, 2.4 M di-Ammonium Phosphate); Cryoprotection (80% Reservoir + 20% diethylene glycol)

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