4PB2
Structure of vcCNT-7C8C bound to 5-fluorouridine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-08-22 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.97918 |
Spacegroup name | P 63 |
Unit cell lengths | 119.772, 119.772, 83.214 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.205 - 2.302 |
R-factor | 0.2011 |
Rwork | 0.200 |
R-free | 0.21600 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3tij |
RMSD bond length | 0.002 |
RMSD bond angle | 0.660 |
Data scaling software | SCALEPACK |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.340 |
High resolution limit [Å] | 2.300 | 6.240 | 2.300 |
Rmerge | 0.067 | 0.038 | 0.500 |
Total number of observations | 116908 | ||
Number of reflections | 29398 | ||
<I/σ(I)> | 14.5 | ||
Completeness [%] | 97.3 | 98.6 | 79.2 |
Redundancy | 4 | 4.4 | 2.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | LIQUID DIFFUSION | 9.5 | 290 | 37-42% PEG 400, 100 mM CaCl2 |