4P6Y
Crystal structure of the M42 aminopeptidase TmPep1050 from Thermotoga maritima
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE BM30A |
Synchrotron site | ESRF |
Beamline | BM30A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-04-27 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9797 |
Spacegroup name | P 1 |
Unit cell lengths | 114.260, 114.570, 114.040 |
Unit cell angles | 114.46, 91.71, 105.69 |
Refinement procedure
Resolution | 44.045 - 2.200 |
R-factor | 0.2136 |
Rwork | 0.212 |
R-free | 0.24740 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ylo |
RMSD bond length | 0.009 |
RMSD bond angle | 1.254 |
Refinement software | PHENIX ((phenix.refine: dev_1539)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.050 | 2.280 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.089 | 0.392 |
Number of reflections | 237152 | |
<I/σ(I)> | 8.56 | 2.22 |
Completeness [%] | 93.5 | 84.76 |
Redundancy | 3.2 | 2.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.75 | 292 | TmPep1050 (390 uM) in 50 mM MOPS pH 7.2 with 0.5 M ammonium sulfate and 1 mM cobalt chloride, was mixed 2:2 with well buffer (2.1M malic acid pH 6.75) with 500 uL well buffer in the well of the crystallization tray |