4P6S
Crystal Structure of tyrosinase from Bacillus megaterium with L-DOPA in the active site
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-4 |
Synchrotron site | ESRF |
Beamline | ID14-4 |
Temperature [K] | 80 |
Detector technology | CCD |
Collection date | 2013-04-28 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9791 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 78.880, 81.550, 84.060 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.004 - 2.200 |
R-factor | 0.1934 |
Rwork | 0.192 |
R-free | 0.22160 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.029 |
RMSD bond angle | 1.707 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.7.3_928)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 58.532 | 47.004 | 2.320 |
High resolution limit [Å] | 2.200 | 6.960 | 2.200 |
Rmerge | 0.052 | 0.382 | |
Rmeas | 0.112 | ||
Rpim | 0.039 | 0.019 | 0.142 |
Total number of observations | 228410 | 7799 | 32190 |
Number of reflections | 28169 | ||
<I/σ(I)> | 13.1 | 25.5 | 5 |
Completeness [%] | 99.8 | 99 | 99.4 |
Redundancy | 8.1 | 7.9 | 8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | PEG8000, sodium cacodylate |