4P5T
14.C6 TCR complexed with MHC class II I-Ab/3K peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X25 |
Synchrotron site | NSLS |
Beamline | X25 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-03-09 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 1.1 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 66.007, 74.142, 259.289 |
Unit cell angles | 90.00, 92.00, 90.00 |
Refinement procedure
Resolution | 47.051 - 3.263 |
R-factor | 0.1888 |
Rwork | 0.186 |
R-free | 0.23620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3rdt |
RMSD bond length | 0.003 |
RMSD bond angle | 0.666 |
Data reduction software | HKL |
Phasing software | PHASER (2.3.0) |
Refinement software | PHENIX ((phenix.refine: 1.8.4_1496)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.310 |
High resolution limit [Å] | 3.250 | 3.250 |
Rmerge | 0.155 | 0.530 |
Number of reflections | 39106 | |
<I/σ(I)> | 12.92 | 3.8 |
Completeness [%] | 99.1 | 97.9 |
Redundancy | 6.6 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 298 | 100mM sodium cacodylate, 200mM sodium citrate, 10% PEG 4000, 0.5% n-octyl-beta-D-glucoside |