4P3B
Crystal structure of the mouse C5a-desArg anaphylatoxin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | MAX II BEAMLINE I911-3 |
Synchrotron site | MAX II |
Beamline | I911-3 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-13 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | P 43 |
Unit cell lengths | 55.210, 55.210, 117.430 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.509 - 2.100 |
R-factor | 0.1825 |
Rwork | 0.180 |
R-free | 0.22410 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4p3a |
RMSD bond length | 0.003 |
RMSD bond angle | 0.711 |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.3_1479)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.200 | |
High resolution limit [Å] | 2.100 | 30.000 | 2.100 |
Rmerge | 0.113 | 0.042 | 0.662 |
Rmeas | 0.123 | 0.049 | 0.722 |
Total number of observations | 131068 | ||
Number of reflections | 20489 | 5 | 2655 |
<I/σ(I)> | 14.62 | 17.24 | 2.95 |
Completeness [%] | 99.9 | 71.4 | 100 |
Redundancy | 6.4 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.3 | 277 | 0.1 M Na acetate pH 4.3, 2.4 M Na Formate, 3 % D-glucose monohydrate |