4P29
Crystal structure of the LpoA N-terminal domain from Haemophilus influenzae
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 5ID-B |
Synchrotron site | APS |
Beamline | 5ID-B |
Temperature [K] | 165 |
Detector technology | CCD |
Collection date | 2003-11-05 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97930 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.030, 51.180, 198.610 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 40.491 - 1.950 |
R-factor | 0.185541194582 |
Rwork | 0.184 |
R-free | 0.21849 |
Structure solution method | MIR |
RMSD bond length | 0.005 |
RMSD bond angle | 0.720 |
Data scaling software | d*TREK (9.3D) |
Phasing software | SOLVE (2.05) |
Refinement software | PHENIX (dev_1888) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 43.240 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.074 | 0.390 |
Number of reflections | 68183 | |
<I/σ(I)> | 10.4 | 3.1 |
Completeness [%] | 98.8 | 100 |
Redundancy | 5.42 | 4.71 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 295 | Drop contained 2 microliters protein and 2 microliters precipitant, and reservoir contained 1 ml of precipitant. Protein:10 mg/ml SeMet-containing LpoA(33-253) in 20 mM Tris-HCl pH 8.0, 0.1 % beta-mercaptoethanol, 1 mM EDTA, 0.1 mM benzamidine. Precipitant: 0.1 M MES pH 6.5, 0.2 M ammonium sulfate, 30% polyethylene monomethyl ether 5000. Cryoprotectant: 10% glycerol in precipitant solution |