4OVR
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM XANTHOBACTER AUTOTROPHICUS PY2, TARGET EFI-510329, WITH BOUND BETA-D-GALACTURONATE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-08 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 90.314, 111.362, 59.546 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 31.501 - 1.650 |
R-factor | 0.142 |
Rwork | 0.141 |
R-free | 0.17030 |
Structure solution method | SAD |
RMSD bond length | 0.010 |
RMSD bond angle | 1.251 |
Data scaling software | SCALA |
Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 111.362 | 111.362 | 1.740 |
High resolution limit [Å] | 1.650 | 5.220 | 1.650 |
Rmerge | 0.040 | 0.745 | |
Rmeas | 0.116 | 0.068 | 0.814 |
Rpim | 0.031 | 0.018 | 0.230 |
Total number of observations | 991316 | 32287 | 126449 |
Number of reflections | 72924 | ||
<I/σ(I)> | 17.9 | 42.8 | 3.5 |
Completeness [%] | 99.9 | 97.9 | 99.9 |
Redundancy | 13.6 | 13 | 12 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 298 | Protein (29.4 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 10 mM D-Galacturonate); Reservoir (00.8 M Lithium Chloride 0.1 M Tris pH 8.5 32 %(w/v) PEG 4000); Cryoprotection (80% of 50% Peg3350, 20% Reservoir) |