4OVQ
CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM ROSEOBACTER DENITRIFICANS, TARGET EFI-510230, WITH BOUND BETA-D-GLUCURONATE
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 31-ID |
Synchrotron site | APS |
Beamline | 31-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-11-26 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9793 |
Spacegroup name | H 3 |
Unit cell lengths | 78.209, 78.209, 134.424 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.148 - 1.501 |
R-factor | 0.1809 |
Rwork | 0.179 |
R-free | 0.21070 |
Structure solution method | SAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.325 |
Phasing software | HKL-3000 |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 1.530 |
High resolution limit [Å] | 1.500 | 4.070 | 1.500 |
Rmerge | 0.073 | 0.042 | |
Total number of observations | 563849 | ||
Number of reflections | 48974 | ||
<I/σ(I)> | 9.3 | ||
Completeness [%] | 99.9 | 98.3 | 100 |
Redundancy | 11.5 | 11.3 | 11.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | Protein (33.12 mg/ml, 10 mM HEPES pH 7.5, 5 mM DTT, 1 mM D-Glucuronate); Reservoir (0.2M Calcium Acetate 0.1 M Tris pH 7.0 20 %(w/v) PEG 3000); Cryoprotection (20% glycerol, 80% Reservoir) |