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4OVE

X-ray Crystal Structure of Mouse Netrin-1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08B1-1
Synchrotron siteCLSI
Beamline08B1-1
Temperature [K]100
Detector technologyCCD
Collection date2011-10-14
DetectorRAYONIX MX-300
Wavelength(s)1.25440
Spacegroup nameP 32 2 1
Unit cell lengths69.754, 69.754, 334.802
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution50.000 - 2.640
R-factor0.233
Rwork0.230
R-free0.28800
Structure solution methodSIRAS
RMSD bond length0.017
RMSD bond angle1.806
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwareREFMAC (5.8.0049)
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.500
Rmerge0.129
Number of reflections27279
<I/σ(I)>8.8
Completeness [%]80.9
Redundancy10.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.72930.1 M HEPES, 2.7-2.8 M NaCl, 0.02-0.2 M glycine, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K
1VAPOR DIFFUSION, HANGING DROP7.72930.1 M HEPES, 2.7-2.8 M NaCl, 0.02-0.2 M glycine, pH 7.7, VAPOR DIFFUSION, HANGING DROP, temperature 293K

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