4OTE
Crystal structure of a putative lipoprotein (CD630_1653) from Clostridium difficile 630 at 2.20 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-07-19 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795,0.9116,0.9792 |
Spacegroup name | P 21 3 |
Unit cell lengths | 120.508, 120.508, 120.508 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.108 - 2.200 |
R-factor | 0.1987 |
Rwork | 0.197 |
R-free | 0.24040 |
Structure solution method | MAD |
RMSD bond length | 0.005 |
RMSD bond angle | 0.968 |
Data reduction software | MOSFLM |
Data scaling software | SCALA (3.3.20) |
Phasing software | SHELX |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.108 | 38.108 | 2.260 |
High resolution limit [Å] | 2.200 | 9.840 | 2.200 |
Rmerge | 0.011 | 0.011 | |
Total number of observations | 1783 | 11227 | |
Number of reflections | 29737 | ||
<I/σ(I)> | 8.4 | 22.8 | 1.6 |
Completeness [%] | 99.7 | 96.4 | 99.9 |
Redundancy | 5.1 | 4.9 | 5.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 277 | 0.16M zinc acetate, 20.0% Glycerol, 14.4% polyethylene glycol 8000, 0.1M sodium cacodylate pH 6.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K |