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4OQU

Structure of the SAM-I/IV riboswitch (env87(deltaU92))

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
Collection date2014-01-17
DetectorADSC QUANTUM 315r
Wavelength(s)0.9999
Spacegroup nameP 64 2 2
Unit cell lengths127.269, 127.269, 181.609
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution31.408 - 3.200
R-factor0.1987
Rwork0.196
R-free0.22630
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle1.252
Data reduction softwareCrystalClear
Data scaling softwareCrystalClear
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8.4_1496))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]41.6603.310
High resolution limit [Å]3.2003.200
Number of reflections14916
Completeness [%]99.8100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7303.151:1 mix of RNA mix and mother liquor. RNA mix contained RNA and 1 mM SAM. Mother liquor contained 50 mM Na-cacodylate, pH 7.0, 250 mM ammonium acetate, 20 mM MgCl2, and 16% 2-methyl-2,4-pentanediol (MPD), VAPOR DIFFUSION, HANGING DROP, temperature 303.15K

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