4OO3
Crystal structure of a putative oxidoreductase (PARMER_00841) from Parabacteroides merdae ATCC 43184 at 2.23 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL11-1 |
Synchrotron site | SSRL |
Beamline | BL11-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-11-26 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.91837,0.97895,0.97959 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 48.437, 93.510, 95.787 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 27.528 - 2.230 |
R-factor | 0.1883 |
Rwork | 0.186 |
R-free | 0.22350 |
Structure solution method | MAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.046 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 27.528 | 2.310 | |
High resolution limit [Å] | 2.230 | 4.780 | 2.230 |
Rmerge | 0.076 | 0.024 | 0.558 |
Number of reflections | 21588 | 4011 | 3912 |
<I/σ(I)> | 9.24 | 26.5 | 1.6 |
Completeness [%] | 96.2 | 96 | 95.3 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 0.2M sodium acetate, 30.0% polyethylene glycol 4000, 0.1M tris hydrochloride pH 8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 293K |