4OJA
Structure of Hydra Cu-Zn superoxide dismutase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2012-02-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.00 |
Spacegroup name | P 64 2 2 |
Unit cell lengths | 70.360, 70.360, 148.960 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.492 - 2.277 |
R-factor | 0.1959 |
Rwork | 0.191 |
R-free | 0.23990 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1srd |
RMSD bond length | 0.013 |
RMSD bond angle | 1.523 |
Data reduction software | PROCESS |
Data scaling software | SCALA (3.3.20) |
Phasing software | PHASER |
Refinement software | PHENIX (1.7.3_928) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 148.960 | 148.960 | 2.400 |
High resolution limit [Å] | 2.277 | 7.200 | 2.280 |
Rmerge | 0.115 | 0.043 | 0.200 |
Rpim | 0.017 | 0.129 | |
Total number of observations | 2723 | 4878 | |
Number of reflections | 9755 | ||
<I/σ(I)> | 16.8 | 37.7 | 5.3 |
Completeness [%] | 92.6 | 94.8 | 87.2 |
Redundancy | 5.8 | 7.1 | 3.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 277 | 0.1M Sodium Acetate Trihydrate, 8% PEG 4000, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 277K |