4OCS
Crystal structure of human Fab CAP256-VRC26.10, a potent V1V2-directed HIV-1 neutralizing antibody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-BM |
Synchrotron site | APS |
Beamline | 22-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-03 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.389, 46.188, 232.526 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.771 - 1.901 |
R-factor | 0.2117 |
Rwork | 0.210 |
R-free | 0.24100 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3u4e |
RMSD bond length | 0.005 |
RMSD bond angle | 0.957 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.940 |
High resolution limit [Å] | 1.901 | 5.180 | 1.901 |
Rmerge | 0.130 | 0.075 | 0.463 |
Number of reflections | 24746 | ||
<I/σ(I)> | 8.4 | 11.7 | 2.5 |
Completeness [%] | 65.2 | 88.7 | 49.3 |
Redundancy | 4.1 | 3.8 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 293 | 22% PEG4000, 0.4 M sodium acetate, 0.1 M Tris, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K |