4O8N
Crystal structure of SthAraf62A, a GH62 family alpha-L-arabinofuranosidase from Streptomyces thermoviolaceus, in the apoprotein form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-01-29 |
Detector | RIGAKU RAXIS IV++ |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 59.807, 65.579, 84.952 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.452 - 1.648 |
R-factor | 0.1286 |
Rwork | 0.127 |
R-free | 0.16300 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.333 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: dev_1538)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 1.680 |
High resolution limit [Å] | 1.648 | 1.648 |
Number of reflections | 39537 | |
<I/σ(I)> | 29.96 | 4 |
Completeness [%] | 96.2 | 92.7 |
Redundancy | 5.9 | 92.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 298 | 18 mg/mL SthAraf62A, 0.1 M Bis-tris propane pH 6.5, 20% PEG 5K MME, VAPOR DIFFUSION, SITTING DROP, temperature 298K |