Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NOJ

Crystal structure of the mature form of asparaginyl endopeptidase (AEP)/Legumain activated at pH 3.5

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL17U
Synchrotron siteSSRF
BeamlineBL17U
Temperature [K]100
Detector technologyCCD
Collection date2012-10-01
DetectorADSC QUANTUM 315
Wavelength(s)0.98
Spacegroup nameP 21 21 21
Unit cell lengths55.308, 59.579, 96.525
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.988 - 2.800
R-factor0.2361
Rwork0.233
R-free0.29400
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.992
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareAMoRE
Refinement softwarePHENIX ((phenix.refine: 1.7.3_928))
Data quality characteristics
 Overall
Low resolution limit [Å]50.000
High resolution limit [Å]2.800
Number of reflections8038
Completeness [%]97.0
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.72980.01 M zinc sulfate, 0.1 M MES, pH 6.7, and 23% PEG 500, VAPOR DIFFUSION, HANGING DROP, temperature 298K

231029

PDB entries from 2025-02-05

PDB statisticsPDBj update infoContact PDBjnumon