4NME
Crystal structure of proline utilization A (PutA) from Geobacter sulfurreducens PCA inactivated by N-propargylglycine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-E |
Synchrotron site | APS |
Beamline | 24-ID-E |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-07-02 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.979180 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 95.235, 151.177, 175.180 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 87.590 - 2.088 |
R-factor | 0.1711 |
Rwork | 0.169 |
R-free | 0.20790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4nmc |
RMSD bond length | 0.007 |
RMSD bond angle | 1.029 |
Data reduction software | XDS |
Data scaling software | SCALA (3.3.16) |
Phasing software | PHENIX |
Refinement software | PHENIX (1.8_1069) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 175.180 | 175.180 | 2.200 |
High resolution limit [Å] | 2.088 | 6.600 | 2.088 |
Rmerge | 0.024 | 0.531 | |
Total number of observations | 21599 | 90118 | |
Number of reflections | 149802 | ||
<I/σ(I)> | 12.5 | 26.5 | 1.4 |
Completeness [%] | 99.7 | 99.5 | 98.6 |
Redundancy | 4.4 | 4.3 | 4.2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 6.5 | 298 | 25-33% PEG550 MME, 0.05-0.2 M Bis-Tris, pH 6.4 - 6.5, 0.05 mM calcium chloride, MICROBATCH, temperature 298K |