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4NI3

Crystal Structure of GH29 family alpha-L-fucosidase from Fusarium graminearum in the closed form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-F
Synchrotron siteAPS
Beamline21-ID-F
Temperature [K]100
Detector technologyCCD
Collection date2013-04-20
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97872
Spacegroup nameP 1
Unit cell lengths53.511, 75.512, 80.367
Unit cell angles105.61, 107.19, 106.71
Refinement procedure
Resolution37.931 - 1.399
R-factor0.1449
Rwork0.145
R-free0.16670
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1HL8 (peptide only)
RMSD bond length0.010
RMSD bond angle1.248
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.8.4_1496)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]37.9311.420
High resolution limit [Å]1.3991.399
Number of reflections198748
<I/σ(I)>2.3
Completeness [%]94.992
Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1batch method8293.151:1 v/v mixture of 14-16 mg/ml alpha-L-fucosidase (stored in 25mM Tris pH 7.5 and partially deglycosylated by incubation 10:1:1 v/v ratio with EndoH and 500 mM sodium citrate pH 5.5 buffer from New England Biolabs for more than 24hrs before setting up the drop) with 40% PEG 2000mme, 0.1M Tris pH 8.0, crystals grow within two days, cryoprotected by Mitegen LV cryo-oil, batch method, temperature 293.15K

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