4NI3
Crystal Structure of GH29 family alpha-L-fucosidase from Fusarium graminearum in the closed form
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-F |
| Synchrotron site | APS |
| Beamline | 21-ID-F |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-04-20 |
| Detector | MARMOSAIC 225 mm CCD |
| Wavelength(s) | 0.97872 |
| Spacegroup name | P 1 |
| Unit cell lengths | 53.511, 75.512, 80.367 |
| Unit cell angles | 105.61, 107.19, 106.71 |
Refinement procedure
| Resolution | 37.931 - 1.399 |
| R-factor | 0.1449 |
| Rwork | 0.145 |
| R-free | 0.16670 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1HL8 (peptide only) |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.248 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.8.4_1496) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 37.931 | 1.420 |
| High resolution limit [Å] | 1.399 | 1.399 |
| Number of reflections | 198748 | |
| <I/σ(I)> | 2.3 | |
| Completeness [%] | 94.9 | 92 |
| Redundancy | 3.5 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | batch method | 8 | 293.15 | 1:1 v/v mixture of 14-16 mg/ml alpha-L-fucosidase (stored in 25mM Tris pH 7.5 and partially deglycosylated by incubation 10:1:1 v/v ratio with EndoH and 500 mM sodium citrate pH 5.5 buffer from New England Biolabs for more than 24hrs before setting up the drop) with 40% PEG 2000mme, 0.1M Tris pH 8.0, crystals grow within two days, cryoprotected by Mitegen LV cryo-oil, batch method, temperature 293.15K |






