Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4NDS

Crystal structure of L. decastes alpha-galactosyl-binding lectin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-1
Synchrotron siteESRF
BeamlineID14-1
Temperature [K]100
Detector technologyCCD
Collection date2007-05-17
DetectorADSC QUANTUM 210
Wavelength(s)0.934
Spacegroup nameP 1 21 1
Unit cell lengths34.840, 56.774, 44.458
Unit cell angles90.00, 107.10, 90.00
Refinement procedure
Resolution17.288 - 0.997
R-factor0.1099
Rwork0.109
R-free0.12450
Structure solution methodSAD
RMSD bond length0.008
RMSD bond angle1.345
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareSHELX
Refinement softwarePHENIX (1.8.2_1309)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.060
High resolution limit [Å]0.9970.997
Rmerge0.0630.507
Number of reflections84151
<I/σ(I)>142.7
Completeness [%]95.092
Redundancy4.13.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.52980.2 M calcium chloride, 0.1 M HEPES sodium, 28% v/v PEG400, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon