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4N6K

Crystal structure of a TRAP periplasmic solute binding protein from Desulfovibrio salexigens DSM2638, Target EFI-510113 (Desal_0342), complex with diglycerolphosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 31-ID
Synchrotron siteAPS
Beamline31-ID
Temperature [K]100
Detector technologyCCD
Collection date2013-10-09
DetectorRAYONIX MX225HE
Wavelength(s)0.971
Spacegroup nameC 1 2 1
Unit cell lengths83.024, 54.182, 73.508
Unit cell angles90.00, 104.98, 90.00
Refinement procedure
Resolution22.313 - 1.200
R-factor0.1397
Rwork0.138
R-free0.16190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)LOCALLY COLLECTED DERIVATIVE
RMSD bond length0.007
RMSD bond angle1.166
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.20)
Phasing softwarePHENIX
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]71.0101.260
High resolution limit [Å]1.2001.200
Rmerge0.0770.553
Number of reflections95981
<I/σ(I)>1.9
Completeness [%]97.693.7
Redundancy3.53.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.629855.8 mg/mL protein in 10 mM HEPES, pH 7.5, 5 mM DTT, reservoir: 0.17 M ammonium acetate, 0.085 M sodium acetate, pH 4.6, 25.5% w/v PEG4000, 15% v/v glycerol, cryoprotection: reservoir + 10% glycerol, VAPOR DIFFUSION, SITTING DROP, temperature 298K

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