4MWG
Crystal structure of Burkholderia xenovorans DmrB apo form: A Cubic Protein Cage for Redox Transfer
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-04-21 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9797 |
Spacegroup name | F 4 3 2 |
Unit cell lengths | 184.180, 184.180, 184.180 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 65.117 - 2.200 |
R-factor | 0.1874 |
Rwork | 0.186 |
R-free | 0.21780 |
Structure solution method | SIRAS |
RMSD bond length | 0.009 |
RMSD bond angle | 1.018 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELXCD |
Refinement software | PHENIX (dev_1457) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 65.200 | 65.146 | 2.260 |
High resolution limit [Å] | 2.200 | 9.840 | 2.200 |
Rmerge | 0.042 | 0.017 | 0.598 |
Rmeas | 0.018 | 0.612 | |
Number of reflections | 14076 | 211 | 981 |
<I/σ(I)> | 57.17 | 142.89 | 7.72 |
Completeness [%] | 99.5 | 97.2 | 96.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 298 | 1.0M (NH4)2SO4, 20mM Tris HCl pH 8, 100mM NaCl, 5% glycerol, 4mM DTT, vapor diffusion, hanging drop, temperature 298K |