Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4MHF

Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_3107), target EFI-510173, with bound alpha/beta D-Glucuronate, space group P21

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2013-08-23
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54178
Spacegroup nameP 1 21 1
Unit cell lengths45.480, 45.960, 63.980
Unit cell angles90.00, 97.66, 90.00
Refinement procedure
Resolution21.582 - 1.460
R-factor0.1187
Rwork0.117
R-free0.14470
Structure solution methodFOURIER SYNTHESIS
RMSD bond length0.008
RMSD bond angle1.249
Data reduction softwareMOSFLM
Data scaling softwareSCALA (3.3.20)
Phasing softwareAMoRE
Refinement softwarePHENIX (1.8.1_1168)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]63.40922.9801.540
High resolution limit [Å]1.4604.6301.460
Rmerge0.0460.0390.133
Total number of observations869436168
Number of reflections41662
<I/σ(I)>26.214.54.9
Completeness [%]92.698.587.8
Redundancy6.35.96.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.5293Protein (> 50 mg/ml, 10 mM Hepes, pH 7.5, 10 mM Glucuronate, 5 mM DTT); Reservoir (2.0 M Ammonium Sulfate, 0.1 M Tris, pH 8.5(MCSG1 F10)); Cryoprotection (20% Diethylene Glycol, 80% of Reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon