4MHF
Crystal structure of a TRAP periplasmic solute binding protein from Polaromonas sp. JS666 (Bpro_3107), target EFI-510173, with bound alpha/beta D-Glucuronate, space group P21
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU RU300 |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 2013-08-23 |
| Detector | RIGAKU RAXIS IV++ |
| Wavelength(s) | 1.54178 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 45.480, 45.960, 63.980 |
| Unit cell angles | 90.00, 97.66, 90.00 |
Refinement procedure
| Resolution | 21.582 - 1.460 |
| R-factor | 0.1187 |
| Rwork | 0.117 |
| R-free | 0.14470 |
| Structure solution method | FOURIER SYNTHESIS |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.249 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA (3.3.20) |
| Phasing software | AMoRE |
| Refinement software | PHENIX (1.8.1_1168) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 63.409 | 22.980 | 1.540 |
| High resolution limit [Å] | 1.460 | 4.630 | 1.460 |
| Rmerge | 0.046 | 0.039 | 0.133 |
| Total number of observations | 8694 | 36168 | |
| Number of reflections | 41662 | ||
| <I/σ(I)> | 26.2 | 14.5 | 4.9 |
| Completeness [%] | 92.6 | 98.5 | 87.8 |
| Redundancy | 6.3 | 5.9 | 6.3 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | Protein (> 50 mg/ml, 10 mM Hepes, pH 7.5, 10 mM Glucuronate, 5 mM DTT); Reservoir (2.0 M Ammonium Sulfate, 0.1 M Tris, pH 8.5(MCSG1 F10)); Cryoprotection (20% Diethylene Glycol, 80% of Reservoir, VAPOR DIFFUSION, SITTING DROP, temperature 293K |






