4MGP
Structure of racemic Ala-(8,13,18) Magainin 2
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-23 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9786 |
Spacegroup name | I -4 2 d |
Unit cell lengths | 53.380, 53.459, 29.750 |
Unit cell angles | 89.97, 90.07, 89.98 |
Refinement procedure
Resolution | 26.690 - 1.750 |
R-factor | 0.1983 |
Rwork | 0.197 |
R-free | 0.23280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2mag |
RMSD bond length | 0.023 |
RMSD bond angle | 2.430 |
Data reduction software | XPREP (2008/2 for Windows) |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 26.720 | 26.720 | 1.790 |
High resolution limit [Å] | 1.750 | 5.110 | 1.750 |
Rmerge | 0.092 | 0.091 | 0.374 |
Number of reflections | 2247 | 114 | 74 |
<I/σ(I)> | 32.17 | 37.11 | 3.9 |
Completeness [%] | 95.4 | 97.4 | 64.3 |
Redundancy | 22.4 | 20.76 | 4.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.6 | 298 | Precipitant solution contained 0.1 M sodium citrate tribasic, pH 5.6, and 35% v/v tert-butanol. No additional cryoprotectant was necessary for vitrification of crystals in LN2, VAPOR DIFFUSION, HANGING DROP, temperature 298K |