4MB7
Crystal Structure of a viral DNA glycosylase
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2011-12-16 |
Detector | PSI PILATUS 6M |
Wavelength(s) | 0.91730 |
Spacegroup name | H 3 2 |
Unit cell lengths | 121.670, 121.670, 164.180 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 38.703 - 2.040 |
R-factor | 0.1895 |
Rwork | 0.185 |
R-free | 0.22530 |
Structure solution method | SIRAS |
RMSD bond length | 0.005 |
RMSD bond angle | 0.916 |
Data scaling software | SCALA |
Phasing software | SOLVE (2.15) |
Refinement software | PHENIX (1.8.2_1309) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 64.760 | 2.090 |
High resolution limit [Å] | 2.040 | 2.040 |
Rmerge | 0.150 | 0.665 |
<I/σ(I)> | 9.5 | 3.3 |
Redundancy | 10.1 | 10.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.8 | 291 | 20% (w/v) polyethylene glycol 3350, and 0.2 M sodium sulfate decahydrate , pH 6.8, VAPOR DIFFUSION, temperature 291K |