4MB6
Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS BEAMLINE X29A |
| Synchrotron site | NSLS |
| Beamline | X29A |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-07-18 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.978 |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 58.560, 78.380, 54.010 |
| Unit cell angles | 90.00, 112.98, 90.00 |
Refinement procedure
| Resolution | 40.190 - 1.810 |
| R-factor | 0.1868 |
| Rwork | 0.184 |
| R-free | 0.23820 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2dy0 |
| RMSD bond length | 0.019 |
| RMSD bond angle | 1.971 |
| Data reduction software | MOSFLM |
| Data scaling software | SCALA (3.3.21) |
| Phasing software | MOLREP |
| Refinement software | REFMAC |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 49.724 | 40.161 | 1.900 |
| High resolution limit [Å] | 1.807 | 5.710 | 1.810 |
| Rmerge | 0.033 | 0.465 | |
| Total number of observations | 3102 | 17465 | |
| Number of reflections | 20429 | ||
| <I/σ(I)> | 18.4 | 20.6 | 1.6 |
| Completeness [%] | 99.2 | 82.7 | 99.1 |
| Redundancy | 6 | 5.5 | 5.9 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 2.4M sodium malonate pH 7.0, Vapor diffusion, Sitting drop, temperature 298K |
