4M5Y
Crystal structure of broadly neutralizing Fab 5J8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 77 |
Detector technology | CCD |
Collection date | 2012-11-17 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.0332 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 90.573, 99.983, 144.333 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 49.151 - 1.550 |
R-factor | 0.173 |
Rwork | 0.172 |
R-free | 0.18650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3MLY CHAINS H AND L |
RMSD bond length | 0.009 |
RMSD bond angle | 1.263 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: 1.8.1_1168)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.570 |
High resolution limit [Å] | 1.550 | 1.550 |
Rmerge | 0.046 | 0.910 |
Number of reflections | 183997 | |
<I/σ(I)> | 21.9 | 1.8 |
Completeness [%] | 96.9 | 72.5 |
Redundancy | 7.3 | 5.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 277 | 0.2 M calcium acetate, 11% PEG3350, pH 8, VAPOR DIFFUSION, SITTING DROP, temperature 277K |