Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4M1N

Crystal structure of Plasmodium falciparum ubiquitin conjugating enzyme UBC9

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL7-1
Synchrotron siteSSRL
BeamlineBL7-1
Temperature [K]100
Detector technologyCCD
Collection date2013-06-12
DetectorADSC QUANTUM 315
Wavelength(s)1.1271
Spacegroup nameC 2 2 21
Unit cell lengths85.190, 90.770, 122.740
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution31.059 - 1.500
R-factor0.1651
Rwork0.164
R-free0.19580
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4jue
RMSD bond length0.007
RMSD bond angle1.195
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX ((phenix.refine: 1.8.2_1309))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]31.00031.0001.540
High resolution limit [Å]1.5006.7101.500
Rmerge0.126
Number of reflections76146
<I/σ(I)>8.6
Completeness [%]100.095.699
Redundancy7.16
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.52930.2 M NaF, 20% PEG3350 Cryo: 30% PEG3350, 10% glycerol, 0.2M NaF, 100mM glycine, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon