4M0J
Crystal structure of a D-amino acid aminotransferase from Burkholderia thailandensis E264
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2013-07-17 |
Detector | MAR scanner 300 mm plate |
Wavelength(s) | 0.9798 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 115.600, 73.980, 76.210 |
Unit cell angles | 90.00, 105.35, 90.00 |
Refinement procedure
Resolution | 44.190 - 2.050 |
R-factor | 0.18141 |
Rwork | 0.179 |
R-free | 0.22374 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1daa |
RMSD bond length | 0.013 |
RMSD bond angle | 1.527 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.7.0032) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.100 |
High resolution limit [Å] | 2.050 | 2.050 |
Rmerge | 0.045 | 0.443 |
Number of reflections | 39005 | |
<I/σ(I)> | 19.8 | 3.18 |
Completeness [%] | 99.6 | 100 |
Redundancy | 3.74 | 3.76 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 289 | 25% PEG4000, 0.2M Cacl2, 0.1M Tris pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K |