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4LGR

Ricin A chain bound to camelid nanobody (VHH3)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X29A
Synchrotron siteNSLS
BeamlineX29A
Temperature [K]100
Wavelength(s)1.08
Spacegroup nameP 21 21 21
Unit cell lengths61.345, 77.423, 121.805
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.220 - 1.650
R-factor0.1808
Rwork0.179
R-free0.20420
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.979
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER (2.1.4)
Refinement softwarePHENIX (1.7.1_743)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.680
High resolution limit [Å]1.6504.4801.650
Rmerge0.0880.0450.516
Number of reflections66357
<I/σ(I)>10.5
Completeness [%]94.197.263.6
Redundancy6.36.42.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION4.5293100 mM NaAcetate, 200 mM Zinc Acetate, 10% PEG 3000, pH 4.5, VAPOR DIFFUSION, temperature 293K

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PDB entries from 2024-05-15

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