4LDM
Crystal Structure of an RNA-free VP40 Octameric Ring
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 85 |
Detector technology | CCD |
Collection date | 2012-06-14 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 1.0000 |
Spacegroup name | P 4 2 2 |
Unit cell lengths | 80.457, 80.457, 47.543 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.543 - 1.850 |
R-factor | 0.1873 |
Rwork | 0.186 |
R-free | 0.20210 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.360 |
Data reduction software | d*TREK |
Data scaling software | d*TREK |
Phasing software | PHASER |
Refinement software | PHENIX ((phenix.refine: dev_1150)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 80.457 | |
High resolution limit [Å] | 1.850 | 1.850 |
Number of reflections | 13881 | |
Completeness [%] | 99.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1 M bicine, 15% PEG20000, 3% dextran sulfate sodium salt (Mr = 5 kDa), pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |