4LAT
Crystal structure of phosphate ABC transporter, periplasmic phosphate-binding protein PstS 1 (PBP1) from Streptococcus pneumoniae Canada MDR_19A in complex with phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2013-06-12 |
Detector | MARMOSAIC 225 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 46.780, 46.780, 209.010 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.770 - 1.880 |
R-factor | 0.1823 |
Rwork | 0.180 |
R-free | 0.22500 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4exl |
RMSD bond length | 0.007 |
RMSD bond angle | 1.041 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((phenix.refine: 1.8.2_1309)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.772 | 1.930 |
High resolution limit [Å] | 1.880 | 1.880 |
Rmerge | 0.098 | 0.602 |
Number of reflections | 22528 | |
<I/σ(I)> | 9.8 | 2.4 |
Completeness [%] | 99.9 | 100 |
Redundancy | 6.1 | 5.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | 1.4 M sodium citrate, 0.1 M HEPES, 2% isopropanol, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 298K |