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4L06

Crystal Structure Analysis of human IDH1 mutants in complex with NADP+ and Ca2+/alpha-Ketoglutarate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 21-ID-D
Synchrotron siteAPS
Beamline21-ID-D
Temperature [K]100
Detector technologyCCD
DetectorRAYONIX MX-300
Wavelength(s)0.9786
Spacegroup nameP 21 21 21
Unit cell lengths96.220, 116.550, 275.710
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution72.166 - 2.282
R-factor0.2265
Rwork0.224
R-free0.27020
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.887
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwarePHENIX (1.8_1069)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]72.17050.0002.490
High resolution limit [Å]2.2825.1702.282
Rmerge0.1040.0690.643
Number of reflections141183
<I/σ(I)>9.5
Completeness [%]94.197.687.6
Redundancy6.46.76.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.929816-20% PEG MME 2000, 100mM MES, pH 6.9, vapor diffusion, temperature 298K

219869

PDB entries from 2024-05-15

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