4KMB
COMPLEX OF 4'-SULFO-LEWIS-X WITH A SELECTIN-LIKE MUTANT OF MANNOSE-BINDING PROTEIN A
Experimental procedure
| Source type | ROTATING ANODE |
| Source details | RIGAKU RUH2R |
| Temperature [K] | 100 |
| Detector technology | IMAGE PLATE |
| Collection date | 1996-05-28 |
| Detector | RIGAKU RAXIS IIC |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 79.100, 85.000, 97.500 |
| Unit cell angles | 90.00, 106.30, 90.00 |
Refinement procedure
| Resolution | 10.000 - 2.000 |
| R-factor | 0.208 |
| Rwork | 0.208 |
| R-free | 0.27200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1rtm |
| RMSD bond length | 0.007 |
| RMSD bond angle | 22.100 * |
| Data reduction software | DENZO |
| Data scaling software | SCALEPACK |
| Phasing software | X-PLOR |
| Refinement software | X-PLOR (3.54) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 40.000 | 2.070 |
| High resolution limit [Å] | 2.000 | 2.000 |
| Rmerge | 0.048 | 0.242 |
| Number of reflections | 34603 | |
| <I/σ(I)> | 12.2 | 4.7 |
| Completeness [%] | 97.5 | 94.7 |
| Redundancy | 2.2 | 2.1 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | Vapor diffusion * | 7.8 | 22 * | PROTEIN WAS CRYSTALLIZED FROM 8-10% PEG 8000, 2% PEG 1000, 100 MM TRIS-CL, PH 7.8, 200 MM NACL, 20 MM CACL2, 2 MM NAN3. PRIOR TO DATA COLLECTION, THE CRYSTAL WAS ADAPTED TO THE MOTHER LIQUOR MINUS PEG 8000, PLUS 35% PEG 400, PLUS 80 MM 4'-SULFO- LEWIS-X. |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | drop | protein | 2 (mg/ml) | |
| 10 | 1 | drop | solution A | ||
| 2 | 1 | drop | 50 (mM) | ||
| 3 | 1 | drop | 5 (mM) | ||
| 4 | 1 | reservoir | PEG8000 | 8-10 (%(w/v)) | solution A |
| 5 | 1 | reservoir | PEG1000 | 2 (%) | solution A |
| 6 | 1 | reservoir | Tris-HCl | 100 (mM) | solution A |
| 7 | 1 | reservoir | 200 (mM) | solution A | |
| 8 | 1 | reservoir | 2 (mM) | solution A | |
| 9 | 1 | reservoir | 20 (mM) | solution A |






